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-specific primers for polymerase chain reaction . Biomed Central Bioinformatics 2012 13 134 . ( https://doi.org/10.1186/1471-2105-13-134 ) 19 Vandesompele J De Preter K Pattyn F Poppe B Van Roy N De Paepe A Speleman F . Accurate normalization
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included the RNA from the entire tumor, the second from the non-invasive area and the third from the invasive foci. Statistical analysis and bioinformatics tools The differential expression analysis among FAs, MI-FTCs and WI-FTCs was performed using
Centre de Référence des Maladies Rares du Calcium et du Phosphore Filière de Santé Maladies Rares OSCAR, Paris, France
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Université Paris-Saclay, Inserm U1185, Physiologie et Physiopathologie Endocriniennes, Assistance Publique-Hôpitaux de Paris, Service d’Endocrinologie et Diabète de l’Enfant, Centre de Référence des Maladies Rares du Calcium et du Phosphore et Filière de Santé Maladies Rares OSCAR, Hôpital Bicêtre Paris Saclay, Le Kremlin-Bicêtre, France
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Development Environment for R (RStudio, Boston, MA, USA; http://www.rstudio.com/ ). Venn diagrams were designed using a publicly available website ( http://bioinformatics.psb.ugent.be ). We considered a P -value <0.05 to be significant in all cases
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– 2240 . ( https://doi.org/10.1093/hmg/ddp158 ) 16 Dehouck Y Kwasigroch JM Gilis D & Rooman M . PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality . BMC Bioinformatics 2011 12 151
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causation. Support from the bio-informatic and genetic experts may be required ( 5 ). Using a combination of targeted genetic testing and exome sequencing (ES), Hauer et al. reported a diagnostic yield of 33% in 565 cases of unexplained short stature
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-calling software and then analyzed using Zymo Research Corp.’s proprietary analysis pipeline. Sequence reads were aligned to the reference genome assembly hg38 using Bismark ( http://www.bioinformatics.babraham.ac.uk/projects/bismark/ ). The methylation level of
Unit of Clinical Physiology, Karolinska University Hospital, Stockholm, Sweden
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patterns by bioinformatic analyses, we aimed to provide further depth into our earlier array study. Collectively, our findings demonstrate a reduction of mRNA expression in ontologies relating to cell proliferation and differentiation. Regulation of SC self
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-gene relationships in localized prostate tumor samples . BMC Bioinformatics 2011 12 1 – 7 . ( https://doi.org/10.1186/1471-2105-12-1 ) 25 Sigurdson A Hauptmann M Chatterjee N Alexander BH Doody MM Rutter JL Struewing JP . Kin
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.0506580102 ) 63 Langfelder P . Horvath S. WGCNA: an R package for weighted correlation network analysis . BMC Bioinformatics 2008 559. ( https://doi.org/10.1186/1471-2105-9-559 ) 64 Astro V Alowaysi M Fiacco E Saera-Vila A Cardona
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.RA118.002983 ) 60 Wang C Yu T Tan L Cheng J . Bioinformatics analysis of gene expression profile in callus tissues of osteoporotic phenotype mice induced by osteoblast-specific Krm2 overexpression . International Journal of Rheumatic Diseases