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European Pancreas Center, Department of General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Heidelberg, Germany
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bioinformatics tools including BLAST and PathCards ( 36 ). To test this hypothesis in pNEN, Western blot was used to detect the expression of ATX following the downregulation of STAT3 expression. As shown in Fig. 3 , in BON1 cells, the siRNA
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the etiology of DSD in 78% of the cohort, 22% of the patients still remained with no diagnosis. Future directions to improve the accuracy of DSD diagnosis, might include using whole-genome sequencing, and improving bioinformatics methods by using
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QuantStudio7 (Applied Biosystems), otherwise as described for regular PCR. Bioinformatics Gene expression data from pheochromocytoma and paraganglioma (PCPG) are available through the Cancer Genome Atlas (TCGA) Research Network ( https
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triiodothyronines predicts worsen neurological outcome of patients with acute ischemic stroke: a retrospective study with bioinformatics analysis . BMC Neurology 2019 19 272. ( https://doi.org/10.1186/s12883-019-1509-x ) 16 Petrone A Mormile F Bruni G
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Karpatne A Kumar V . Introduction to Data Mining , 2nd ed ., Chapter 8. London, UK : Pearson , 2018 . 19 Wilkin GA Huang X . A practical comparison of two K-Means clustering algorithms . BMC Bioinformatics 2008 (Supplement 6) S19
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bioinformatic and statistical analyses. Manuscript writing was carried out by A J, J L, M F, S A, C L R, G A and J B. All authors contributed to the manuscript revision. Acknowledgements The authors are grateful to Sonja Steinhauer for the expert
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clustered using the RDP classifier ( http://rdp.cme.msu.edu/ ) and compared with Silva database (SSU128/16s bacteria) at 70% comparison threshold. Bioinformatics analysis Silva database was selected for comparison with threshold of 70% to obtain the
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.3%) duplicates, and (1.1%) all exon deletion. All of these mutations were predicted to be deleterious, analyzed by online bioinformatics tools. Another six mutations were located outside the coding region involving c.1254-1G > C, c.208 + 3A > T, c.46-2A > G, c
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-specific primers for polymerase chain reaction . Biomed Central Bioinformatics 2012 13 134 . ( https://doi.org/10.1186/1471-2105-13-134 ) 19 Vandesompele J De Preter K Pattyn F Poppe B Van Roy N De Paepe A Speleman F . Accurate normalization